BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002F04SP1|AL424994
(209 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1751 385 e-107
>3x_Contig1751
Length = 24682
Score = 385 bits (193), Expect = e-107
Identities = 197/199 (98%)
Strand = Plus / Plus
Query: 1 gatcaaaacggaagagaaacaaaacaacatctatacttcatttatttgaatcattgcctt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19163 gatcaaaacggaagataaacaaaacaacatctatacttcatttatttgaatcattgcctt 19222
Query: 61 ctcctaagaacgattttgaaattgtattggatgatttagatgaagaaatggaatccactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19223 ctcctaagaacgattttgaaattgtattggatgatttagatgaagaaatggaatccactg 19282
Query: 121 atgcttttaatactgaaagttcgtatgtkaatggtaaatatcccctagaagccttaatat 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 19283 atgcttttaatactgaaagttcgtatgttaatggtaaatatcccctagaagccttaatat 19342
Query: 181 cttccacggaacatcaatc 199
|||||||||||||||||||
Sbjct: 19343 cttccacggaacatcaatc 19361
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2058
Number of Sequences: 1807
Number of extensions: 2058
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 209
length of database: 10,358,551
effective HSP length: 15
effective length of query: 194
effective length of database: 10,331,446
effective search space: 2004300524
effective search space used: 2004300524
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.2 bits)